Gene expression analysis of M. tuberculosis in patients with and without HIV co-infection

Group 3: Anne Skov-Johannessen s184330, Dea F. Skipper, Helene B. L. Petersen s194699, Johanne B. Overgaard s194691 and Rebecca C. Grenov

Introduction

Co-infection with tuberculosis (TB) is the leading cause of death in HIV-infected individuals.

Introduction

Purpose of data collection Data origin Data handling Remove irrelevant variables Change ugly variables Handle replications

Methods

Discriptive analysis

Methods

Normalization Log2

Methods

Analysis PCA Linear regression

Results

PCA

Results

Results

Linear regression Forest plot

Results

Volcano plot

Discussion

Compare significant genes with the genes found in the article